Merge pull request #6 from ChristophSchranz/master

build Dockerfile on latest version of docker-stack

src/Dockerfile.header

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+# Use NVIDIA CUDA as base image and run the same installation as in the other packages.
+FROM nvidia/cuda:10.1-base-ubuntu18.04
+LABEL maintainer="Jupyter Project <jupyter@googlegroups.com>"

src/Dockerfile.pytorch

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+# Install PyTorch dependencies
+RUN conda install --quiet --yes \
+    pyyaml mkl mkl-include setuptools cmake cffi typing && \
+    conda clean --all -f -y && \
+    fix-permissions $CONDA_DIR && \
+    fix-permissions /home/$NB_USER
+
+# Install PyTorch
+RUN conda install -y -c pytorch \
+    cudatoolkit=10.1 \
+    'pytorch=1.3.1' \
+    torchvision && \
+    conda clean --all -f -y && \
+    fix-permissions $CONDA_DIR && \
+    fix-permissions /home/$NB_USER

src/Dockerfile.usefulpackages

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+# Update conda
+RUN conda update -n base conda -y
+
+USER root
+
+# Install rpy2 to share data between Python and R
+RUN conda install rpy2=2.9.4 plotly=4.4.1
+RUN conda install -c conda-forge ipyleaflet
+
+# Install important packages and Graphviz
+RUN set -ex \
+ && buildDeps=' \
+    graphviz==0.11 \
+' \
+ && apt-get update \
+ && apt-get -y install htop apt-utils graphviz libgraphviz-dev \
+ && pip install --no-cache-dir $buildDeps
+
+# Install various extensions
+RUN jupyter labextension install @jupyterlab/github
+RUN jupyter labextension install jupyterlab-drawio
+RUN jupyter labextension install jupyter-leaflet
+RUN jupyter labextension install @jupyterlab/plotly-extension
+RUN jupyter labextension install @jupyter-widgets/jupyterlab-manager
+RUN pip install --no-cache-dir jupyter-tabnine==1.0.2  && \
+  jupyter nbextension install --py jupyter_tabnine && \
+  jupyter nbextension enable --py jupyter_tabnine && \
+  jupyter serverextension enable --py jupyter_tabnine
+RUN fix-permissions $CONDA_DIR
+RUN conda install -c conda-forge jupyter_contrib_nbextensions && \
+  conda install -c conda-forge jupyter_nbextensions_configurator && \
+  jupyter nbextension enable codefolding/main
+RUN jupyter labextension install @ijmbarr/jupyterlab_spellchecker
+
+# Copying config and fix permissions
+COPY jupyter_notebook_config.json /etc/jupyter/
+RUN fix-permissions /home/$NB_USER
+
+# Switch back to jovyan to avoid accidental container runs as root
+USER $NB_UID