338 lines
9.0 KiB
Plaintext
Executable File
338 lines
9.0 KiB
Plaintext
Executable File
{
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"cells": [
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"# Getting Started\n",
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"\n",
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"**Markdown** is a method to write documentations and even embed `HTML` and `Latex` formulas.\n",
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"\n",
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"### Jupyter tutorial\n",
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"\n",
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"[](https://www.youtube.com/watch?v=CwFq3YDU6_Y?rel=0&showinfo=0)\n",
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"\n",
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"\n",
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"### Bayesian Rule\n",
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"$$P(A \\mid B) = \\frac{P(B \\mid A)P(A)}{P(B)}$$"
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"## Coding and magic commands"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 1,
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"metadata": {},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"[1, 8, 27, 64, 125, 216, 343]"
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]
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},
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"execution_count": 1,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"[x**3 for x in range(1,8)]"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 2,
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"metadata": {},
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"outputs": [
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{
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"data": {
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"application/json": {
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"cell": {
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"!": "OSMagics",
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"HTML": "Other",
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"SVG": "Other",
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"bash": "Other",
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"capture": "ExecutionMagics",
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"debug": "ExecutionMagics",
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"file": "Other",
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"html": "DisplayMagics",
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"javascript": "DisplayMagics",
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"js": "DisplayMagics",
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"latex": "DisplayMagics",
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"markdown": "DisplayMagics",
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"perl": "Other",
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"prun": "ExecutionMagics",
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"pypy": "Other",
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"python": "Other",
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"python2": "Other",
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"python3": "Other",
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"ruby": "Other",
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"script": "ScriptMagics",
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"sh": "Other",
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"svg": "DisplayMagics",
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"sx": "OSMagics",
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"system": "OSMagics",
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"time": "ExecutionMagics",
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"timeit": "ExecutionMagics",
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"writefile": "OSMagics"
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},
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"line": {
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"alias": "OSMagics",
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"alias_magic": "BasicMagics",
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"autoawait": "AsyncMagics",
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"autocall": "AutoMagics",
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"automagic": "AutoMagics",
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"autosave": "KernelMagics",
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"bookmark": "OSMagics",
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"cat": "Other",
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"cd": "OSMagics",
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"clear": "KernelMagics",
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"colors": "BasicMagics",
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"conda": "PackagingMagics",
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"config": "ConfigMagics",
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"connect_info": "KernelMagics",
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"cp": "Other",
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"debug": "ExecutionMagics",
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"dhist": "OSMagics",
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"dirs": "OSMagics",
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"doctest_mode": "BasicMagics",
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"ed": "Other",
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"edit": "KernelMagics",
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"env": "OSMagics",
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"gui": "BasicMagics",
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"hist": "Other",
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"history": "HistoryMagics",
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"killbgscripts": "ScriptMagics",
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"ldir": "Other",
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"less": "KernelMagics",
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"lf": "Other",
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"lk": "Other",
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"ll": "Other",
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"load": "CodeMagics",
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"load_ext": "ExtensionMagics",
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"loadpy": "CodeMagics",
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"logoff": "LoggingMagics",
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"logon": "LoggingMagics",
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"logstart": "LoggingMagics",
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"logstate": "LoggingMagics",
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"logstop": "LoggingMagics",
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"ls": "Other",
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"lsmagic": "BasicMagics",
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"lx": "Other",
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"macro": "ExecutionMagics",
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"magic": "BasicMagics",
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"man": "KernelMagics",
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"matplotlib": "PylabMagics",
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"mkdir": "Other",
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"more": "KernelMagics",
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"mv": "Other",
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"notebook": "BasicMagics",
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"page": "BasicMagics",
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"pastebin": "CodeMagics",
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"pdb": "ExecutionMagics",
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"pdef": "NamespaceMagics",
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"pdoc": "NamespaceMagics",
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"pfile": "NamespaceMagics",
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"pinfo": "NamespaceMagics",
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"pinfo2": "NamespaceMagics",
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"pip": "PackagingMagics",
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"popd": "OSMagics",
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"pprint": "BasicMagics",
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"precision": "BasicMagics",
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"prun": "ExecutionMagics",
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"psearch": "NamespaceMagics",
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"psource": "NamespaceMagics",
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"pushd": "OSMagics",
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"pwd": "OSMagics",
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"pycat": "OSMagics",
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"pylab": "PylabMagics",
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"qtconsole": "KernelMagics",
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"quickref": "BasicMagics",
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"recall": "HistoryMagics",
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"rehashx": "OSMagics",
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"reload_ext": "ExtensionMagics",
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"rep": "Other",
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"rerun": "HistoryMagics",
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"reset": "NamespaceMagics",
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"reset_selective": "NamespaceMagics",
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"rm": "Other",
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"rmdir": "Other",
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"run": "ExecutionMagics",
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"save": "CodeMagics",
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"sc": "OSMagics",
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"set_env": "OSMagics",
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"store": "StoreMagics",
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"sx": "OSMagics",
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"system": "OSMagics",
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"tb": "ExecutionMagics",
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"time": "ExecutionMagics",
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"timeit": "ExecutionMagics",
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"unalias": "OSMagics",
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"unload_ext": "ExtensionMagics",
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"who": "NamespaceMagics",
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"who_ls": "NamespaceMagics",
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"whos": "NamespaceMagics",
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"xdel": "NamespaceMagics",
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"xmode": "BasicMagics"
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}
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},
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"text/plain": [
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"Available line magics:\n",
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"%alias %alias_magic %autoawait %autocall %automagic %autosave %bookmark %cat %cd %clear %colors %conda %config %connect_info %cp %debug %dhist %dirs %doctest_mode %ed %edit %env %gui %hist %history %killbgscripts %ldir %less %lf %lk %ll %load %load_ext %loadpy %logoff %logon %logstart %logstate %logstop %ls %lsmagic %lx %macro %magic %man %matplotlib %mkdir %more %mv %notebook %page %pastebin %pdb %pdef %pdoc %pfile %pinfo %pinfo2 %pip %popd %pprint %precision %prun %psearch %psource %pushd %pwd %pycat %pylab %qtconsole %quickref %recall %rehashx %reload_ext %rep %rerun %reset %reset_selective %rm %rmdir %run %save %sc %set_env %store %sx %system %tb %time %timeit %unalias %unload_ext %who %who_ls %whos %xdel %xmode\n",
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"\n",
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"Available cell magics:\n",
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"%%! %%HTML %%SVG %%bash %%capture %%debug %%file %%html %%javascript %%js %%latex %%markdown %%perl %%prun %%pypy %%python %%python2 %%python3 %%ruby %%script %%sh %%svg %%sx %%system %%time %%timeit %%writefile\n",
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"\n",
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"Automagic is ON, % prefix IS NOT needed for line magics."
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]
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},
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"execution_count": 2,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"# List all magic commands\n",
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"%lsmagic"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 3,
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"metadata": {},
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"outputs": [],
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"source": [
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"import numpy as np \n",
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"x = np.random.normal(0, 1, 1_000_000)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 4,
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"metadata": {},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"1.03 ms ± 4.93 µs per loop (mean ± std. dev. of 7 runs, 1000 loops each)\n"
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]
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}
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],
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"source": [
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"%%timeit \n",
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"x.mean()**2 - (x**2).mean()"
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"## Send variables back and fourth in bash\n",
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"\n",
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"The strings will be saved as files in the working directory"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 5,
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"metadata": {},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"string_0\n",
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"string_1\n",
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"string_2\n",
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"string_3\n",
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"string_4\n"
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]
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}
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],
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"source": [
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"for i in range(5):\n",
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" string = \"string_{}\".format(i)\n",
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" print(string)\n",
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" !touch $string"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 6,
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"metadata": {},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"-rw-r--r-- 1 jovyan users 0 Dec 19 08:44 string_0\n",
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"-rw-r--r-- 1 jovyan users 0 Dec 19 08:44 string_1\n",
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"-rw-r--r-- 1 jovyan users 0 Dec 19 08:44 string_2\n",
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"-rw-r--r-- 1 jovyan users 0 Dec 19 08:44 string_3\n",
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"-rw-r--r-- 1 jovyan users 0 Dec 19 08:44 string_4\n"
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]
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}
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],
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"source": [
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"!ls -l | grep string_"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 7,
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"metadata": {},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"['string_0', 'string_1', 'string_2', 'string_3', 'string_4']"
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]
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},
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"execution_count": 7,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"files = !ls -1 string_*\n",
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"!rm string_*\n",
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"files"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {},
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"outputs": [],
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"source": []
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}
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],
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"metadata": {
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"kernelspec": {
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"display_name": "Python 3",
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"language": "python",
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"name": "python3"
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},
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"language_info": {
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"codemirror_mode": {
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"name": "ipython",
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"version": 3
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},
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"file_extension": ".py",
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"mimetype": "text/x-python",
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"name": "python",
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"nbconvert_exporter": "python",
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"pygments_lexer": "ipython3",
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"version": "3.7.3"
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}
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},
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"nbformat": 4,
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"nbformat_minor": 4
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}
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